RNA

Part:BBa_K4511002:Design

Designed by: Chris Dong   Group: iGEM22_HUS_United   (2022-10-10)


dtRNA19


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

The general structure of this part is a hairpin, but stem length, stem GC content, and loop size should be carefully adjusted for the successful implementation of its function. The detailed relationship between their functions and structural features or sequences is concluded in the article(Zhang et al., 2019) by high-throughput screening and corresponding analysis.


Source

The sequence correspondent with the designated hairpin structure and is one of the candidate sequences designed by NUPACK in the literature(Zhang et al., 2019).

References